Life continues for Tomoya. Months have passed since he confessed his love to Nagisa. Now entering the second semester, he continues to meet a variety of people, expanding his own world in the process. Tomoya and Nagisa's relationship enters a new level of intimacy. Through his relationship with Nagisa, Tomoya begins to understand the meaning and importance of family. But as Tomoya and Nagisa begin their own family, they are faced with many hardships along the way in CLANNAD ~ After Story.